New GPU3 projects for the Fermi: 10927-10978 & 11214-11265

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Yu-Shan Lin is continuing the testing of the GPU3 core, adding two new project series for Fermi-based cards. According to Yu-Shan Lin, the projects are intended to provide performance evaluations of the new openmm-gromacs core on Fermi boards, using the Generalised Born model as an implicit solvent. Different force fields and inner dielectric constants are used for this set of simulations.

The 10927-10978 series incorporate Protein-G peptide simulations, while projects 11214-11265 deal with simulations on the Fs peptide.

These projects are distributed by the server at 171.67.108.32, and have the following properties:

  • 10927-10978: 247 atoms, 925 points, preferred deadline of 14 days, final deadline of 20 days
  • 11214-11265: 264 atoms, 912 points, preferred deadline of 14 days, final deadline of 20 days


Source: Official Forum